(en)Cell permeable bioactive peptide conjugates having a first bioactive peptide region coupled to a second transport peptide region allowing transfer of the first bioactive peptide region and the second transport peptide region across biological membranes to enter intact living cells for regulation of biological responses.

1.ApplicationNumber: US-89004607-A
1.PublishNumber: US-2009030178-A1
2.Date Publish: 20090129
3.Inventor: CHANG JAW-KANG

4.Inventor Harmonized: CHANG JAW-KANG(US)

5.Country: US
6.Claims:
(en)Cell permeable bioactive peptide conjugates having a first bioactive peptide region coupled to a second transport peptide region allowing transfer of the first bioactive peptide region and the second transport peptide region across biological membranes to enter intact living cells for regulation of biological responses.

7.Description:
(en)This United States patent application claims the benefit of U.S. Provisional Patent Application No. 60/835,365, filed Aug. 2, 2006, hereby incorporated by reference.


I. BACKGROUND
Cell permeable bioactive peptide conjugates having a first bioactive peptide region coupled to a second transport peptide region allowing transfer of the first bioactive peptide region and the second transport peptide region across biological membranes to enter intact living cells for regulation of biological responses.
Various proteins and protein fragments have been shown to regulate biological responses which are of either therapeutic or research interest, or both. However, a substantial problem in utilizing these proteins, protein fragments, or chemically synthesized peptides to regulate the corresponding intracellular processes can be the level of biological availability, if any, at target receptors in the living cell, whether in-vitro or in-vivo. This lack of biological availability may be due to insolubility, a binding affinity to surrounding substrates that is greater than to the target cell receptor, instability with respect to cleavage, or with respect to modification of the peptide backbone, N-terminus, C-terminus, side chain, or other peptide or chemical moiety.
With respect to proteins or peptides such as insulin or humanin, instability with respect to cleavage or modification can to an extent be overcome by administration by injection into or proximate to the tissue which presents the corresponding binding receptors of the protein or peptide, or by introduction by injection into the circulatory system to be carried to the tissue(s) which present the corresponding binding receptors to the protein or peptide, as shown by the following examples:
Humanin has recently been shown to provide protection against forms of Alzheimer's Disease. Humanin is a 24 amino acid linear polypeptide with a single cysteine at position 8. As with insulin, humanin is rapidly degraded by gastrointestinal enzymes, and thus administration by injection may be the only presently available route to deliver the peptide. “A rescue factor abolishing neuronal cell death by wide spectrum of familial Alzheimer's disease genes and A β ” Y. Hashimoto, T. Niikura, H. Tajima, T. Yasukawa, H. Sudo, Y. Ito, Y. Kita, M. Kawasumi, K. Koumaya, M. Doyu, G. Sobue, T. Koide, S. Tsuji, J. Lang, K. Kurokawa, and I. Nishimoto, Proc. Natl. Acad. Sci. U.S.A., 98, 6336 (2001), hereby incorporated by reference herein.
Apelin peptides are now known to be endogenous ligands at the orphan G-protein coupled receptor, APJ. Apelin and its receptor have been found in the brainstem and shown to have a role in haemodynamic homeostasis. Apelin microinjections into the nucleus tractus solitarius (“NTS”) can result in either apnea or decreased phrenic nerve discharge amplitude by up to 30%. Increases of 10-20 mm Hg in arterial pressure can also evoked from microinjection of Apelin into either of the NTS and the RVLM. “Site-specific effects of apelin-13 in the rat medulla oblongata on arterial pressure and respiration” Auton Neurosci. 101(1-2):32-8 (2002), hereby incorporated by reference herein.
In both rodents and humans, ghrelin functions to increase hunger though its action on hypothalamic feeding centers. This makes sense relative to increasing plasma ghrelin concentrations observed during fasting. Additionally, humans injected with ghrelin reported sensations of intense hunger. Ghrelin also appears to suppress fat utilization in adipose tissue, which is somewhat paradoxical considering that growth hormone has the opposite effect. Overall, ghrelin seems to be one of several hormonal signals that communicates the state of energy balance in the body to the brain. “Ghrelin causes hyperphagia and obesity in rats”, A. M. Wren et al. Diabetes 50(11):2540-72001, hereby incorporated by reference herein.
Peptide YY(3-36) (PYY(3-36)), a Y2R agonist, is released from the gastrointestinal tract postprandially in proportion to the calorie content of a meal. Peripheral injection of PYY(3-36) in rats inhibits food intake and reduces weight gain. PYY(3-36) also inhibits food intake in mice but not in Y2r-null mice, which suggests that the anorectic effect requires the Y2R. Peripheral administration of PYY(3-36) increases c-Fos immunoreactivity in the arcuate nucleus and decreases hypothalamic Npy messenger RNA. Intra-arcuate injection of PYY(3-36) inhibits food intake. PYY(3-36) also inhibits electrical activity of NPY nerve terminals, thus activating adjacent pro-opiomelanocortin (POMC) neurons. In humans, infusion of normal postprandial concentrations of PYY(3-36) significantly decreases appetite and reduces food intake by 33% over 24 h. Thus, postprandial elevation of PYY(3-36) may act through the arcuate nucleus Y2R to inhibit feeding in a gut-hypothalamic pathway. “Gut hormone PYY(3-36) physiologically inhibits food intake”, R. L. Batterham et al. Nature 418(6898):650-654 (2002), hereby incorporated by reference herein.
Intracerebroventricular injections of alpha-MSH in diet-induced obese rats results in significantly enhanced nocturnal inhibitory feeding responses. Significantly greater inhibition of nocturnal feeding by alpha-MSH and reduction in PVN alpha-MSH peptide level, suggests melanocortinergic signalling may be reduced in obesity which may account for the hyperphagia of these animals when presented with a palatable diet. “Enhanced inhibitory feeding response to alpha-melanocyte stimulating hormone in the diet-induced obese rat”, M. J. Hansen, M. J. Ball and M. J. Morris, Brain Res. 892(1):130-137 (2001), hereby incorporated by reference herein.
Xenografts of MDA-MB-468 human breast carcinoma injected subcutaneously for 6 weeks with Bomesin peptides showed powerfully suppressed growth causing a complete regression of 2 tumors. “Inhibition of growth of MDA-MB-468 estrogen-independent human breast carcinoma by bombesin/gastrin-releasing peptide antagonists RC-3095 and RC-3940-11”, Zsuzsanna et al. Cancer, Vol. 88, Issue 6, 1384-1392 (2000), hereby incorporated by reference herein.
Atrial natriuretic peptide (ANP) has the effects of a vasodilator (including the pulmonary arteries) and a physiologic diuretic. “Hemodynamic Effects of Human Atrial Natriuretic Peptide After Modified Fontan Procedure”, Takeshi Hiramatsu, MD, Yasuharu Imai, MD, Yoshinori Takanashi, MD, Kazuhiro Seo, MD, Masatsugu Terada, MD, Makoto Nakazawa, MD Ann Thorac Surg 1998; 65:761-764. Exogenous ANP administration has resulted in numerous physiological responses, including rapid natriuresis, diuresis, and reduction in arterial blood pressure. “Encapsulated transgene cells attenuate hypertension, cardiac hypertrophy and enhance renal function in Goldblatt hypertensive rats” Li-Guo Chen et al. The Journal of Gene medicine 6:786-797 (2004), hereby incorporated by reference herein.
Brain natriuretic peptide delivered by infusion can influence cardiovascular homeostasis mainly by reducing cardiac preload. administration of pharmacological doses of BNP to humans and experimental animals markedly affects systemic hemodynamics and renal function, because it is followed by a reduction of arterial pressure and PVR and an increase in diuresis and natriuresis. “Cardiovascular Effects of Brain Natriuretic Peptide in Essential Hypertension”, Giorgio La Villa; Gianni Bisi; Chiara Lazzeri; Caterina Fronzaroli; Laura Stefani; Giuseppe Barletta; Riccarda Del Bene; Gianni Messeri; Gaetano Strazzulla; Franco Franchi, Hypertension, 25, 1053-1057 (1995), hereby incorporated by reference herein.
Intracerebroventricular injection of recombinant CART in rats inhibits normal and starvation-induced feeding and completely blocks the feeding response elicited by NPY. Peripheral leptin administration in obese mice stimulates CART mRNA expression. CART antisera increases feeding in normal rats suggesting that CART is an endogenous regulator of food intake. Kristensen, P. et al., Nature 393, 72-76 (1998), hereby incorporated by reference herein.
CNS administration of Agouti related protein decreased oxygen consumption and decreased the capacity of BAT to expend energy. This reduction in oxygen consumption leading to a reduction in energy expenditure, together with the stimulation in food intake, may be the mechanisms by which Agrp causes an increase in body weight and adiposity. “Chronic CNS administration of Agouti related protein (Agrp) reduces energy expenditure”, C J Small, Y L Liu, S A Stanley, I P Connoley, A Kennedy, M J Stock & S R Bloom, Endocrine Abstracts 3 OC46, hereby incorporated by reference herein.
Exendin (9-39) binds to but does not activate the GLP-1 receptor, and functions as a GLP-1 receptor antagonist Exendin-3, a novel peptide from Heloderma horridum venom, interacts with vasoactive intestinal peptide receptors and a newly described receptor on dispersed acini from guinea pig pancreas. Exendin (9-39) administered acutely has been employed as a GLP-1R antagonists in multiple preclinical studies and in human experiments to probe the consequences of disrupting GLP-1R activation. J Biol. Chem. 1991 Feb. 15; 266(5):2897-902, hereby incorporated by reference herein.
Neuromedin U (NMU) is a neuropeptide with potent activity on smooth muscle which was isolated first from porcine spinal cord and later from other species. It is widely distributed in the gut and central nervous system. Peripheral activities of NMU include stimulation of smooth muscle, increase of blood pressure, alteration of ion transport in the gut, control of local blood flow and regulation of adrenocortical function. NMU is expressed in the ventromedial hypothalamus in the rat brain, and its level is significantly reduced following fasting. Intracerebroventricular administration of NMU markedly suppresses food intake in rats and may indicate that NMU is involved in the central control of feeding. “Identification of Receptors for Neuromedin U and its Role in Feeding” Howard et al. Nature 406, 70-75 (Jul. 6, 2000), hereby incorporated by reference herein.
The systemic administration of synthetic hexapeptide of growth hormone-releasing peptide selectively releases growth hormone in many species including man. Growth hormone-releasing peptide directly stimulates growth hormone release by an action at the level of the pituitary. “Systemic administration of growth hormone-releasing peptide activates hypothalamic arcuate neurons”, S. L. Dickson, G. Leng and I. C. Robinson, Neuroscience. 1993 March; 53(2):303-6, hereby incorporated by reference herein.
Intravenous injection of recombinant coupling factor 6 peptide increased blood pressure, apparently by suppressing prostacyclin synthesis, whereas a specific Ab to coupling factor 6 decreased systemic blood pressure concomitantly with an increase in plasma prostacyclin. Interestingly, the antibody's hypotensive effect could be abolished by treating with the cyclooxygenase inhibitor indomethacin. “Mitochondrial coupling factor 6 as a potent endogenous vasoconstrictor” Tomohiro Osanai, Makoto Tanaka, Takaatsu Kamada, Takao Nakano, Koki Takahashi, Satoko Okada, Kenichi Sirato, Koji Magota, Shiho Kodama, and Ken Okumura, J. Clin. Invest. 108(7) 1023-1030 (2001).
Octreotide injection provides a long-acting pharmacologic action mimicking those of the natural hormone somatostatin. Like somatostatin, octreotide suppresses LH response, gastrin, vasoactive intestinal peptide, secretin, motilin, and pancreatic polypeptide. Norvartis Pharmaceuticals Corporation, East Hanover, N.J., Publication T2002-82 (2002).
Intravenous injection of PACAP-27 can produce dose-dependent decreases in mean arterial blood pressure and hindquarter and mesenteric vascular resistances in saline-treated rats and can produce dose-dependent increases in heart rate. “Hemodynamic actions of systemically injected pituitary adenylate cyclase activating polypeptide-27 in the rat” E. J. Whalen, A. K. Johnson, S. J. Lewis; European Journal of Pharmacology Vol. 365, No. 2, pages 205-215 (1999).
Intra peritoneal injection of an 8-mer peptide derived from the nonreceptor-binding domain of urokinase (A6) has been shown to have antiangiogenic and proapoptotic effects to block the progression of breast cancer in vivo. “An antiangiogenic urokinase-derived peptide combined with tamoxifen decreases tumor growth and metastasis in a syngeneic model of breast cancer” Y. Guo, A. P. Mazar, J. J. Lubrun, and S. A. Rabbani, Cancer Res. 2002 Aug. 15; 62(16):4678-84.
GLP-1 derivatives and analogues to both rodents and man have shown promising effects on food intake and body weight suggesting that such therapies constitute potential anti-obesity treatment. In the central nervous system, pre-proglucagon and hence GLP-1, GLP-2 and OXM are exclusively found in a small population of nerve cells in the nucleus of the solitary tract. These constitute a neural pathway linking the “viscero-sensory” brainstem to hypothalamic nuclei involved in energy homeostasis. Intracerebroventricular administration of all of the three derived peptides robustly decrease food intake. It is evident that central GLP-1 agonism probably in combination with GLP-2 and/or OXM agonism constitute a potential pharmacological tool to reduce food intake and may be also enhance energy expenditure. This and other aspects of the current state of the role of central pre-proglucagon in energy homeostasis are reviewed. Larsen P J, Vrang N, Tang-Christensen M. Curr Pharm Des. 2003; 9(17): 1373-82.
Calcitonin injection suppresses resorption of bone by inhibiting the activity of osteoclasts, a cell type that “digests” bone matrix, releasing calcium and phosphorus into blood. Calcitonin 8-32 can be a potent agonist at the hCTr, with similar efficacy as human calcitonin, and a potency of 11 nM. These results were confirmed in cyclic AMP assays. Responses to calcitonin and PHM-27 could be suppressed by the antagonist salmon calcitonin (8-32). In competition binding studies, salmon calcitonin (8-32), calcitonin, and PHM-27 were each able to inhibit ̂1̂2̂5I-calcitonin from cell membranes containing transiently expressed hCTr. These results indicate that the orphan peptide PHM-27 is a potent agonist at the hCTr. Discovery of novel peptide/receptor interactions: identification of PHM-27 as a potent agonist of the human calcitonin receptor Ma, J.-N., Currier, E. A., Essex, A., Feddock, M., Spalding, T. A., Nash, N. R., Brann, M. R., Burstein, E. S., Biochemical Pharmacology, Vol. 67, No. 7.
C-peptide, a cleavage product of proinsulin to insulin processing, induces nitric oxide (NO)-mediated vasodilation upon injection. C-peptide (70 nmol/kg iv) can significantly improved coronary flow. Moreover, C-peptide enhanced basal NO release from rat aortic segments. Young L H, et al. Am J Physiol Heart Circ Physiol. 279(4):H1453-9 (2000), hereby incorporated by reference herein.
Calcitonin Gene Related Peptide is a potent hypotensive agent and a member of the Calcitonin/CGRP multigene complex. This peptide is 37 amino acids long containing one disulfide bridge. CGRP has been shown upon injection to elevate the flow of blood and enhance the contractibility of the atrium. Zaidi, M. et al., Critical Reviews in Clinical Laboratory Sciences 28, No. 2, 109 (1990), hereby incorporated by reference herein.
Melanin-concentrating hormone (MCH), a neuropeptide expressed in central and peripheral nervous systems which plays an important role in the control of feeding behaviors and energy metabolism. MCH and alpha-MSH exert opposing and antagonistic influences on feeding behavior and the stress response and may function in a coordinate manner to regulate metabolism through a novel mechanism mediated in part by an MCH receptor. Intracerebroventricular administration in rats increased food intake in a dose-dependent manner and lowered plasma glucocorticoid levels through a mechanism involving ACTH. In contrast, alpha-MSH decreased food intake and increased glucocorticoid levels. MCH, at a twofold molar excess, antagonized both actions of alpha-MSH. alpha-MSH, at a threefold molar excess, blocked the orexigenic properties of MCH. MCH did not block alpha-MSH binding or the ability of alpha-MSH to induce cAMP in cells expressing either the MC3 or MC4 receptor, the principal brain alpha-MSH receptor subtypes. These data suggest that MCH and alpha-MSH exert opposing and antagonistic influences on feeding behavior and the stress response and may function in a coordinate manner to regulate metabolism through a novel mechanism mediated in part by an MCH receptor.” “Melanin-concentrating hormone: a functional melanocortin antagonist in the hypothalamus” David S. Ludwig, Kathleen G. Mountjoy, Jeffrey B. Tatro, Jennifer A. Gillette, Robert C. Frederich, Jeffrey S. Flier, and Eleftheria Maratos-Flier Am J Physiol Endocrinol Metab 274: E627-E633, 1998, hereby incorporated by reference herein.
Another problem associated with certain peptides such as Adrenomedullin a 52-amino acid peptide hormone with structural homology to calcitonin gene-related peptide may be that administration by aerosol requires a wt/v peptide to carrier which makes the therapuetic use of the peptide prohibitively expensive. While the aerosol administration of adrenomedullin peptide may in certain instances provide long-lasting reduction in moncrotalin-induced pulmonary hypertension and pulmonary vascular resistance, the amount of peptide utilized to achieve efficacy may prohibit commercialization as a therapy. “Adrenomedullin: a smart road from pheochromocytoma to treatment of pulmonary hypertension.” M. Westphal, M. Booke and A. T. Dinh-Xuan Eur Respir J 24; 518:520 (2004).
Understandably, there appears to be a large commercial market for synthetic peptides which target binding sites as agonists or antagonists of the corresponding biological activity of the above-described naturally occurring proteins and peptides, whether in whole or in part, and which could be administered without injection, or which have enhanced biological activity as agonist or antagonists upon delivery by injection or aerosol.
II. SUMMARY OF THE INVENTION
Accordingly, a broad object of the invention can be to provide synthetic peptides capable of transferring across the cell membrane and further capable of targeting the binding sites of the corresponding above-described proteins or peptides, or of other proteins or peptides for which the biologically active peptide region is set out in the Figures or the Sequence Listing, as either agonists or antagonists of the corresponding biological activity.
A second broad object of the invention can be to provide synthetic peptides which target the binding sites which correspond to the above described biological activities as agonists or antagonists and further include the Tat transduction domain (RKKRRQRRR) HIV 1 49-57 (also referred to herein as the “Tat peptide” or “N-terminal Tat peptide” when coupled to the N-terminus of a biologically active peptide region or “C-terminal Tat peptide” when coupled to the C-terminus of a biologically active peptide region) allowing the entire synthetic peptide to traverse or transfer across the cell membrane.
A third broad object of the invention can be to provide synthetic peptides which target the binding sites which correspond to the above described biological activities as agonists or antagonists and include Penetratin (RGIKIWFQNRRMKWKK)(also referred to herein as the “Penetrin peptide” or “N-terminal Penetrin peptide” when coupled to the N-terminus of a biologically active peptide region or “C-terminal Penetrin peptide” when coupled to the C-terminus of a biologically active peptide region) allowing the entire synthetic peptide to traverse the cell membrane.
Naturally, further objects of the invention are disclosed throughout other areas of the specification and drawings.



III. A BRIEF DESCRIPTION OF THE DRAWINGS
FIG. 1 is the primary sequence of first embodiment of the second transport region of the invention comprising the Tat peptide (RKKRRQRRR) HIV 1 49-57.
FIG. 2 is the primary sequence of a second embodiment of the second transport region of the invention comprising the Penetratin peptide (RQIKIWFQNRRMKWKK).
FIG. 3 is the primary sequence of HIV-1 30-86.
FIG. 4 illustrates a combined BOC and FMOC synthesis strategy to generate the primary sequence of HIV-1 30-86 using S-acetamidomethyl-L-cysteine (Cys-Acm) at residues 30 and 34 and S-Trt-L-cysteine at residues 31 and 37.
FIG. 5 is an embodiment of the invention including a peptide which results from treatment of the protected BOC and FMOC synthesis product of FIG. 4 with hydrogen fluoride.
FIG. 6 is an embodiment of the invention including a peptide product which results from I 2 /HOAc treatment of the peptide cleavage product of FIG. 5 to form a disulfide bridge Cys 31-Cys37.
FIG. 7 is an embodiment of the invention including a peptide product which results from further treatment of the peptide of FIG. 6 with iodine in HOAc to form a disulfide bridge Cys 30-Cys34.
FIG. 8 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 1).
FIG. 9 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 31-48 and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 2).
FIG. 10 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 32-48 and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 3).
FIG. 11 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 33-48 and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 4).
FIG. 12 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 34-48 and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 5).
FIG. 13 is an embodiment of the invention which comprises a first bioactive peptide region of HIV 1 30-48 (Cys 30-Cys31 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 6).
FIG. 14 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 30-Cys 34 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 7).
FIG. 15 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 30-Cys 37 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 8).
FIG. 16 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 31-Cys 34 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 9).
FIG. 17 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 31-Cys 37 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 10).
FIG. 18 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 34-Cys 37 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 11).
FIG. 19 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 30-Cys 31 disulfide)(Cys 34-Cys 37 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 12).
FIG. 20 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 30-Cys 34 disulfide)(Cys 31-Cys 37 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 13).
FIG. 21 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 30-Cys 37 disulfide)(Cys 31-Cys 34 disulfide) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 14).
FIG. 22 is an embodiment of the invention which comprises a first bioactive peptide region of HIV1 30-48 (Cys 30 ACM)(Cys 31-Cys 37 disulfide)(Cys 34 ACM) and a second transport peptide region HIV1 49-57 (SEQ. ID. NO.: 15).
FIG. 23 is the primary sequence of an embodiment of the invention A6(uPA 136-143) C-terminal Tat peptide (SEQ ID NO.: 16).
FIG. 24 is the primary sequence of an embodiment of the invention Humanin C-terminal Tat peptide (SEQ ID NO.: 17).
FIG. 25 is the primary sequence of an embodiment of the invention Humanin N-terminal Tat peptide (SEQ ID NO.: 18).
FIG. 26 is the primary sequence of an embodiment of the invention pGlu1-Apelin-13 C-terminal Tat peptide (SEQ ID NO.: 19).
FIG. 27 is the primary sequence of an embodiment of the invention Apelin-13 C-terminal Tat peptide (SEQ ID NO.: 20).
FIG. 28 is the primary sequence of an embodiment of the invention Ghrelin, desoctyoyl (Human) C-terminal Tat peptide (SEQ ID NO.: 21).
FIG. 29 is the primary sequence of an embodiment of the invention Ghrelin, desoctyoyl (Mouse and Rat) C-terminal Tat peptide (SEQ ID NO.: 22).
FIG. 30 is the primary sequence of an embodiment of the invention Ghrelin, octyoyl (Human) C-terminal Tat peptide (SEQ ID NO.: 23).
FIG. 31 is the primary sequence of an embodiment of the invention Angiotensin II C-terminal Tat peptide (SEQ ID NO.: 24).
FIG. 32 is the primary sequence of an embodiment of the invention Angiotensin I/II (1-7) C-terminal Tat peptide (SEQ ID NO.: 25).
FIG. 33 is the primary sequence of an embodiment of the invention Angiotensin IV C-terminal Tat peptide (SEQ ID NO.: 26).
FIG. 34 is the primary sequence of an embodiment of the invention Growth Hormone Releasing Peptide-6 C-terminal Tat peptide (SEQ ID NO.: 27).
FIG. 35 is the primary sequence of an embodiment of the invention PYY3-36 C-terminal C-terminal Tat peptide (SEQ ID NO.: 28).
FIG. 36 is the primary sequence of an embodiment of the invention PYY3-36 N-terminal Tat peptide (SEQ ID NO.: 29).
FIG. 37 is the primary sequence of an embodiment of the invention MSH, alpha, C-terminal Tat peptide (SEQ ID NO.: 30).
FIG. 38 is the primary sequence of an embodiment of the invention MCH, C-terminal Tat peptide (SEQ ID NO.: 31).
FIG. 39 is the primary sequence of an embodiment of the invention Bromesin, C-terminal Tat peptide (SEQ ID NO.: 32).
FIG. 40 is the primary sequence of an embodiment of the invention Human Insulin-C-terminal Tat peptide (SEQ ID NO.: 33).
FIG. 41 is the primary sequence of an embodiment of the invention Human ANP alpha C-terminal Tat peptide (SEQ ID NO.: 34).
FIG. 42 is the primary sequence of an embodiment of the invention Human BNP C-terminal Tat peptide (SEQ ID NO.: 35).
FIG. 43 is the primary sequence of an embodiment of the invention Rat BNP C-terminal Tat peptide (SEQ ID NO.: 36).
FIG. 44 is the primary sequence of an embodiment of the invention Human CART (55-102) C-terminal Tat peptide (SEQ ID NO.: 37).
FIG. 45 is the primary sequence of an embodiment of the invention Human AGRP (83-132) C-terminal Tat peptide (SEQ ID NO.: 38).
FIG. 46 is the primary sequence of an embodiment of the invention N-terminal Tat peptide-GLP-1 (7-37) (SEQ ID NO.: 39).
FIG. 47 is the primary sequence of an embodiment of the invention GLP-1 (7-37)—C-terminal Tat peptide (SEQ ID NO.: 40).
FIG. 48 is the primary sequence of an embodiment of the invention Exendin-4 (3-39)-C-terminal Tat peptide (SEQ ID NO.: 41).
FIG. 49 is the primary sequence of an embodiment of the invention N-terminal Tat peptide-Exendin-4 (3-39) (SEQ ID NO.: 42).
FIG. 50 is the primary sequence of an embodiment of the invention Exendin-3-C-terminal Tat peptide (SEQ ID NO.: 43).
FIG. 51 is the primary sequence of an embodiment of the invention Human C-peptide-Tat peptide (SEQ ID NO.: 44).
FIG. 52 is the primary sequence of an embodiment of the invention Human CGRP(8-37)-Tat peptide (SEQ ID NO.: 45).
FIG. 53 is the primary sequence of an embodiment of the invention Human Aredomedullin-C-terminal Tat peptide (SEQ ID NO.: 46).
FIG. 54 is the primary sequence of an embodiment of the invention Human Aredomedullin (AM) Pro-N-20-C-terminal Tat peptide (SEQ ID NO.: 47).
FIG. 55 is the primary sequence of an embodiment of the invention PACAP38-C-terminal Tat peptide (SEQ ID NO.: 48).
FIG. 56 is the primary sequence of an embodiment of the invention PACA27-C-terminal Tat peptide SEQ ID NO.: 49).
FIG. 57 is the primary sequence of an embodiment of the invention Salmon Calcitonin (disulfide bridge Cys1-Cys7)-Tat peptide (SEQ ID NO.: 50).
FIG. 58 is the primary sequence of an embodiment of the invention Salmon Calcitonin (8-32)-C-terminal Tat peptide (SEQ ID NO.: 51).
FIG. 59 is the primary sequence of an embodiment of the invention Human Neuromedin U-C-terminal Tat peptide (SEQ ID NO.: 52).
FIG. 60 is the primary sequence of an embodiment of the invention Porcine Neuromedin-C-terminal Tat peptide (SEQ ID NO.: 53).
FIG. 61 is the primary sequence of an embodiment of the invention Rat Neuromedin-C-terminal Tat peptide (SEQ ID NO.: 54).
FIG. 62 is the primary sequence of an embodiment of the invention N-terminal Tat-Octreotide (SEQ ID NO.: 55).
FIG. 63 is the primary sequence of an embodiment of the invention N-Terminal Tat peptide-Octeotide, Tyr3 (SEQ ID NO.: 56).
FIG. 64 is the primary sequence of an embodiment of the invention Coupling Factor 6 (CF6 Precursor (55-108) C-terminal Tat peptide (SEQ ID NO.: 57).
FIG. 65 is the primary sequence of an embodiment of the invention Coupling Factor 6 (CF̂ Precursor (33-108)-C-terminal Tat peptide (SEQ ID NO.: 58).
FIG. 66 is the primary sequence of an embodiment of the invention A6(uPA 136-143)—C-terminal Penetratin peptide (SEQ ID NO.: 59).
FIG. 67 is the primary sequence of an embodiment of the invention Humanin-C-terminal Penetratin peptide (SEQ ID NO.: 60).
FIG. 68 is the primary sequence of an embodiment of the invention N-Terminal Penetratin peptide-Humanin (SEQ ID NO.: 61).
FIG. 69 is the primary sequence of an embodiment of the invention pGlu1-Apelin-C-terminal Penetratin peptide (SEQ ID NO.: 62).
FIG. 70 is the primary sequence of an embodiment of the invention Apelin-C-terminal Penetratin peptide (SEQ ID NO.: 63).
FIG. 71 is the primary sequence of an embodiment of the invention Human Ghrelin, des-octanoyl-Penetratin peptide (SEQ ID NO.: 64).
FIG. 72 is the primary sequence of an embodiment of the invention Mouse/Rat Ghrelin, octanoyl-C-terminal Penetratin peptide (SEQ ID NO.: 65).
FIG. 73 is the primary sequence of an embodiment of the invention Human Ghrelin-C-terminal Penetratin peptide (SEQ ID NO.: 66).
FIG. 74 is the primary sequence of an embodiment of the invention Angiotensin II-C-terminal Penetratin peptide (SEQ ID NO.: 67).
FIG. 75 is the primary sequence of an embodiment of the invention Angiotensin I/II (1-7)-C-terminal Penetratin peptide (SEQ ID NO.: 68).
FIG. 76 is the primary sequence of an embodiment of the invention Angiotensin IV-C-terminal Penetratin peptide (SEQ ID NO.: 69).
FIG. 77 is the primary sequence of an embodiment of the invention Growth Hormone Releasing Peptide-6 (GHRP 6)(D-Lys3)—C-terminal Penetratin peptide (SEQ ID NO.: 70).
FIG. 78 is the primary sequence of an embodiment of the invention Human PYY (3-36)-C-terminal Penetratin peptide (SEQ ID NO.: 71).
FIG. 79 is the primary sequence of an embodiment of the invention C-Terminal Penetratin PYY(3-36) Human (SEQ ID NO.: 72).
FIG. 80 is the primary sequence of an embodiment of the invention MSH, alpha, —C-terminal Penetratin peptide (SEQ ID NO.: 73).
FIG. 81 is the primary sequence of an embodiment of the invention MCH (disulfide bridge Cys7-Cys16)-C-terminal Penetratin peptide (SEQ ID NO.: 74).
FIG. 82 is the primary sequence of an embodiment of the invention Bobesin-C-terminal Penetratin peptide (SEQ ID NO.: 75).
FIG. 83 is the primary sequence of an embodiment of the invention Human Insulin-C-terminal Penetratin peptide (SEQ ID NO.: 76).
FIG. 84 is the primary sequence of an embodiment of the invention Human ANP, alpha (Cys 7-Cys 23)-C-terminal Penetratin peptide (SEQ ID NO.: 77).
FIG. 85 is the primary sequence of an embodiment of the invention Human BNP32 (disulfide bridge Cys10-Cys 26)-C-terminal Penetratin peptide (SEQ ID NO.: 78).
FIG. 86 is the primary sequence of an embodiment of the invention Rat BNP32 (disulfide bridge Cys10-Cys 26)-C-terminal Penetratin peptide (SEQ ID NO.: 79).
FIG. 87 is the primary sequence of an embodiment of the invention Human CART (disulfide bridges Cys 14-Cys 32; Cys 20-Cys 40; and Cys 34-Cys 47)-C-terminal Penetratin peptide (SEQ ID NO.: 80).
FIG. 88 is the primary sequence of an embodiment of the invention Human AGRP (83-132)-C-terminal Penetratin peptide (SEQ ID NO.: 81).
FIG. 89 is the primary sequence of an embodiment of the invention N-Terminal Penetratin-GLP-1 (7-37) (SEQ ID NO.: 82).
FIG. 90 is the primary sequence of an embodiment of the invention GLP-1 (7-37)—C-terminal Penetratin peptide (SEQ ID NO.: 83).
FIG. 91 is the primary sequence of an embodiment of the invention Exendin-4(3-39)-C-terminal Penetratin peptide (SEQ ID NO.: 84).
FIG. 92 is the primary sequence of an embodiment of the invention N-Terminal Penetratin-Exendin-4(3-39) (SEQ ID NO.: 85).
FIG. 93 is the primary sequence of an embodiment of the invention Extendin-3-C-terminal Penetratin peptide (SEQ ID NO.: 86).
FIG. 94 is the primary sequence of an embodiment of the invention Human C-peptide-Penetratin peptide (SEQ ID NO.: 87).
FIG. 95 is the primary sequence of an embodiment of the invention CGRP(8-37)—C-terminal Penetratin peptide (SEQ ID NO.: 88).
FIG. 96 is the primary sequence of an embodiment of the invention Human Aredomedullin (disulfide bridge Cys 16-Cys 21)-C-terminal Penetratin peptide (SEQ ID NO.: 89).
FIG. 97 is the primary sequence of an embodiment of the invention Human Aredomedullin (AM Pro-N-20 (PAMP-20)-C-terminal Penetratin peptide (SEQ ID NO.: 90).
FIG. 98 is the primary sequence of an embodiment of the invention PACAP38-C-terminal Penetratin peptide (SEQ ID NO.: 91).
FIG. 99 is the primary sequence of an embodiment of the invention PACAP27-C-terminal Penetratin peptide (SEQ ID NO.: 92).
FIG. 100 is the primary sequence of an embodiment of the invention Salmon Calcitonin (disulfide bridge Cys 1-Cys 7)-C-terminal Penetratin peptide (SEQ ID NO.: 93).
FIG. 101 is the primary sequence of an embodiment of the invention Salmon Calcitonin (8-32)-C-terminal Penetratin peptide (SEQ ID NO.: 94).
FIG. 102 is the primary sequence of an embodiment of the invention Human Neuromedin U-C-terminal Penetratin peptide (SEQ ID NO.: 95).
FIG. 103 is the primary sequence of an embodiment of the invention Porcine Neuromedin U-8-C-terminal Penetratin peptide (SEQ ID NO.: 96).
FIG. 104 is the primary sequence of an embodiment of the invention Rat Neuromedin-C-terminal Penetratin peptide (SEQ ID NO.: 97).
FIG. 105 is the primary sequence of an embodiment of the invention Octreotide-C-terminal Penetratin peptide (SEQ ID NO.: 98).
FIG. 106 is the primary sequence of an embodiment of the invention Octreotide, Tyr 3-Penetratin peptide (SEQ ID NO.: 99).
FIG. 107 is the primary sequence of an embodiment of the invention Coupling Factor 6 (CF6 Precursor (55-108)-Penetratin peptide (SEQ ID NO.: 100).
FIG. 108 is the primary sequence of an embodiment of the invention Coupling Factor 6 (CF6 Precursor (33-108)-Penetratin peptide (SEQ ID NO.: 101).



IV. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
Cell permeable bioactive peptide conjugates having a first bioactive peptide region coupled to a second transport peptide region allowing transfer of the first bioactive peptide region and the second transport peptide region across biological membranes to enter intact living cells for regulation of biological responses.
First referring primarily to FIGS. 1 and 2 , the transport peptide region of the invention can include either of the “Tat” transduction peptide (RKKRRQRRR) HIV 1 49-57 (see FIG. 1 ) or the Penetratin peptide (RQIKIWFQNRRMKWKK) (see FIG. 2 ). The transport peptide region can be coupled to each one the bioactive peptide regions further discussed below to produce inventive peptide conjugates which can transport across biological membranes into the living cell to regulate the corresponding biological responses.
Now referring primarily to FIGS. 3-7 , which provides a non-limiting example of the a chemical synthesis method by which each transport peptide region and each bioactive peptide region and the corresponding bioactive peptide conjugates set forth by SEQ ID NOS.: 1-101) can be chemically synthesized by a solid phase peptide synthesis method using BOC-AA-resin as the solid support (as to the example shown by FIGS. 3-7 BOC-Glu(OcHex)-resin 0.6 mM/g, 0.67 g total 0.2 mM) and by addition of fluorenyloxymethylcarbonyl (FMOC) amino acids or tertbutyloxymethylcarbonyl (BOC) amino acids with either an automated peptide synthesizer or manually using FMOC or BOC synthesis techniques.
Naturally, other peptide synthesis strategies can be used to generate the polypeptides described herein and any specific synthesis strategy described herein is intended to allow the person of ordinary skill in the art to make and use the various embodiments of the cell permeable bioactive peptides encompassed by the invention and any particular synthesis described is not intended to be limiting with regard to alternate methods of making and using the various embodiments of the invention. See also, “Solid Phase Peptide Synthesis: A Practical Approach”, E. Atherton and R. C. Sheppard, IRL Press, Oxford, England, hereby incorporated by reference.
FIGS. 3-7 specifically provides an illustrative example of a solid phase synthesis scheme for the synthesis of residues 30-86 of HIV-Tat (HIV-1 30-86) (see FIG. 3 ) which provides differentially protected cysteine residues, S-acetamidomethyl-L-cysteine (Cys-Acm) to be incorporated at residue 30 and at residue 34 and S-Trt-L-cysteine to be incorporated at residue 31 and at residue 37 during chemical synthesis when an FMOC synthesis strategy is employed for the addition of cysteine amino acid residues, as shown by FIG. 4 (this same strategy can be employed to synthesis any one of the inventive cell permeable bioactive peptides). Hydrogen fluoride cleavage of the protected HIV-1 30-86-resin including these S-protected cysteine residues yields a crude HIV-1 30-86 with S-acetamidomethyl-L-cysteine (Cys-Acm) residues at positions 30 and 34 and Cys-SH residues at positions 31 and 37, as shown by FIG. 5 .
The resulting mixture of polypeptides from the chemical synthesis of HIV-1 30-86 (or the resulting mixture of polypeptides from the chemical synthesis of any one of the cell permeable bioactive peptide conjugates described herein) can be separated from one another by reverse phase HPLC using columns packed with silica having a pore of between 80Δ and 300Δ and a C-4, C-8, or C-18 ligand attached. The columns can be equilibrated with 0.1% trifluoroacetic acid in water at a flow rate dependent on column size as would be understood by those of ordinary skill in the art. The synthetic peptide mixtures can be applied to the reverse phase HPLC columns and eluted with 0.1% trifluoroacetic acid in acetonitrile using a gradient of 0% to about 80% over a period of about 30 minutes to about 1 hour. Fractions can be collected at about 0.5 minute intervals. Fractions can be subsequently analyzed for homogeneity by re-application and elution from the reverse phase HPLC system, mass spectrometry, SDS-PAGE, or automated Edman degradation on an Applied Biosystems Model 470A protein sequencer. As described by Applied Biosystems, Inc., Foster City, Calif.
Purification by HPLC as above-described can result in an amount of HIV-1 30-86 Cys-Acm 30 and 34 peptide as shown by FIG. 5 of sufficient quantity (about 16 milligrams with respect to the above-described synthesis and purification) and purity to be introduced into assays as described below or further treated with I 2 /HOAc to form a disulfide bridge between Cys 31 and Cys 37 (Cys 31-Cys 37), as shown by FIG. 6 . Again purification of the I 2 /HOAc treated peptide by HPLC, as above-described, can result in an amount of HIV-1 30-86 Cys-Acm 30 and Cys-Acm 34 and Cys 31-Cys 37 which can be introduced into assays as described below or can be further treated with iodine in HOAc (7.5 mL and 25 mL respectively) to form a second disulfide bridge between Cys 30 and Cys 34 resulting in HIV-1 30-86 Cys 30-Cys 34 and Cys 31-Cys 37 as shown by FIG. 7 . HIV-1 30-86 Cys 30-Cys 34 and Cys 31-Cys 37 can again be HPLC purified as above-described to yield a purified HIV-1 30-86 Cys 30-Cys 34 and Cys 31-Cys 37 (about 3.05 mg in the above-described synthesis and purification) which presents a single significant peak on chromatograms when analyzed utilizing analytical HPLC and generates a single molecular ion at 6506.1 (M. W. 6505.42). Reduction of the disulfide bridges at Cys 30-Cys 34 and Cys 31-Cys 37, or other disulfide bridges with a reductant such as dithiothreitol, can result in the linear free sulfhydryl peptide such as HIV 1-30-86 peptide as shown by FIG. 3 .
Now referring primarily to FIGS. 8-12 , smaller linear HIV1 peptides such as HIV1-30-57 (SEQ ID. NO.: 1) as shown by FIG. 8 ; HIV1-31-57 (SEQ ID. NO.: 2) as shown by FIG. 9 ; HIV1-32-57 (SEQ ID. NO.: 3) as shown by FIG. 10 ; HIV1-33-57 (SEQ ID. NO.: 4) as shown by FIG. 11 ; and HIV1-34-57 (SEQ ID. NO.: 5) as shown by FIG. 12 can be chemically synthesized in similar fashion as above-described. Each of these HIV1 peptides provide a first bioactive peptide region as a bioactive N-terminal region and further provide the “Tat” transduction peptide (RKKRRQRRR) as a C-terminal transport region. Each of these HIV1 peptides transfer across the biological membrane to enter intact living cells and can regulate biological responses as further discussed.
Now referring primarily to FIGS. 13-22 , S-acetamidomethyl-L-cysteine (Cys-Acm) and S-Trt-L-cysteine can be incorporated in various combinations and permutations of residue 30, residue 31, residue 34 and residue 37 to generate isomeric peptides of HIV 1 30-57 (SEQ ID. NO.: 1) including one or more disulfide bridges of to produce HIV1 30-57 (Cys30-Cys31) (SEQ ID NO.: 6) as shown by FIG. 13 ; HIV1 30-57 (Cys30-Cys34) (SEQ ID NO.: 7) as shown by FIG. 14 ; HIV1 30-57 (Cys30-Cys37) (SEQ ID. NO.: 8) as shown by FIG. 15 ; HIV1 30-57 (Cys31-Cys34) (SEQ ID NO.: 9) as shown by FIG. 16 ; HIV1 30-57 (Cys31-Cys37) (SEQ ID NO.: 10) as shown by FIG. 17 ; HIV1 30-57 (Cys34-Cys37) (SEQ ID NO.: 11) as shown by FIG. 18 ; HIV1 30-57 (Cys30-Cys31)(Cys 34-Cys37) (SEQ ID NO.: 12) as shown by FIG. 19 ; HIV1 30-57 (Cys30-Cys34)(Cys 31-Cys37) (SEQ ID NO.: 13) as shown by FIG. 20 ; HIV1 30-57 (Cys30-Cys37)(Cys 31-Cys34) (SEQ ID NO.: 14) as shown by FIG. 21 ; HIV1 30-57 (Cys31-Cys37)(Cys 31-ACM)(Cys34-ACM) (SEQ ID NO.: 15) as shown by FIG. 22 , each providing the “Tat” transduction peptide (RKKRRQRRR) as a C-terminal transport region. Each of these HIV1 peptides transfer across the biological membrane to enter intact living cells and can regulate biological responses as further discussed.
Now referring to Table I other peptide fragments of the C-terminal region of the HIV1 30-86 peptide (shown in FIG. 5 ) including as a non-limiting example HIV1 48-86; HIV1 48-84; HIV1 58-86; HIV1 62-86; and HIV1 61-80 and the peptide fragments of the C-terminal of the HIV1 30-57 peptide including as a non-limiting example the HIV1 49-57 Tat Region as shown by Figure can each be chemically synthesized an purified as above-described.
The invention also encompasses additional polypeptides or peptide fragments of HIV1 polypeptide sequences listed or as above-described which have substantially similar amino acid sequence as to the biologically active region HIV1 30-48; HIV1 31-48; HIV1 32-48; HIV 33-48; HIV 34-48 and which are capable of transfer into the cell by including a transport peptide region such as the “Tat” transduction peptide (RKKRRQRRR) HIV 1 49-57 (see FIG. 1 ), or by replacement of the “Tat” transduction peptide with the Penetratin peptide (RQIKIWFQNRRMKWKK) (see FIG. 2 ), or a poly-Arginine peptide (such as RRRRRRRRR).
As to the HIV1 polypeptides above described and other peptides conjugates in the sequence listing, silent substitutions of amino acid residues wherein the replacement of the residue with structurally or chemically similar residue(s) which do not significantly alter the structure, conformation, or activity of the polypeptide are intended to fall within the scope of the claims of this application including without limitation silent substitutions of amino acids of the purified polypeptides described above or set out in the Sequence Listing and further including instances in which one or more residues has been removed from either end or both ends, or from an internal region of the peptides (for example without limitation removal of one or more residues between position 41 and position 48 of the HIV1 32-57 peptide), or wherein one or more residues is added to either end or both ends, or to an internal location in either peptide (for example without limitation insertion of one or more residues between position 41 and position 48 of the HIV1 30-57 peptide or HIV1 32-57 peptide). Additionally, purified polypeptides having chemical moieties or residues added for chemical or radiolabeling, such as, an added tyrosine for 125 iodine labeling are also understood to be encompassed by the invention. Similarly, the N-terminus of purified polypeptide encompassed by the invention can be prepared as amino, acetyl, formyl, or left with a residual FMOC or BOC group intact. As to certain other embodiments of the invention, the C-terminus was left bound to the resin, or cleaved to yield various C-terminal moieties, such as carboxyl or amide by choice of the corresponding BHA, PAM, or amide solid phase resin.
Similarly, as to the specific peptide sequences included in the sequence listing, or as described above, each peptide or peptide analog is intended to be included within the description of this application. Moreover, with respect to those specific peptides which contain a single cysteine residue or a plurality of cysteine residues in the linear sequence, the numerous and wide variety of molecular structures capable of being generated by forming one or a plurality of disulfide bridge within a single peptide or between a plurality of peptides is also intended to be encompassed by this description.
Importantly, because certain peptide fragments of the HIV 1 Tat polypeptides encompassed by the invention have between one and four cysteine residues in their respective amino acid sequence these peptide fragments can be useful in generating numerous and varied peptide analogs which contain disulfide bridges as above-described or otherwise. Peptide fragments of the HIV 1 Tat polypeptides encompassed by the invention which contain certain disulfide bridges or combinations of disulfide bridges unexpectedly demonstrate similar or altered biological activity compared to the intact HIV 1 Tat polypeptides. As described below, the biological activity exhibited by the various peptide fragments of HIV 1 polypeptides, peptide fragments of HIV 1 polypeptides chemically synthesized, or peptide analogs thereof, can be greater or lesser than the intact HIV 1 Tat polypeptides and as such, the invention affords peptide fragments of HIV 1 Tat polypeptides which afford a graded range of biological activity.
To demonstrate biological activity of peptide fragments of HIV 1 polypeptides, peptide fragments of HIV 1 polypeptides chemically synthesized, or peptide analogs thereof, the mobilization of intracellular Ca 2+ can be measured. Neurons can be isolated from cerebral cortex according to the protocols for postnatal dissociated nuerons as disclosed for example by Huettner, J. E. and Baughman, R. W., Primary Culture of Identified Neurons From the Visual Cortex of Postnatal Rats , Journal of Neurosciences 6; 3044-3060 (1986); Brewer, G. J., Isolation and Culture of Adult Rat Hippocampal Neurons , Journal of Neuroscience Methods, 71:143-155 (1997); and Brailoiu et al., NAADP Potentiates Neurite Outgrowth , Journal of Biological Chemistry (in press), each hereby incorporated by reference. Newborn Sprague-Dawley rates (about 1 day to about 4 days old) were killed by cervical dislocation. Cerebral cortex was removed and quickly immersed in ice-cold phosphate buffer solution. After removal of meninges, tissue was minced into about I-millimeter blocks, incubated for about 45 minutes at 37° C. in Hanks balanced salt solution without Ca 2+ and Mg 2+ (Invitrogen, 1600 Faraday Avenue, Carlsbad, Calif. 92008) and supplemented with about 200 ug/mL penicillin, 0.1% EDTA and papain 0.15 mg/mL (Sigma-Aldrich, St. Louis, Mo.). In accordance with the procedure disclosed by Brewer, the tissue can be further dissociated by gentle mechanical trituration. After centrifugation at 500× g, cells can be re-suspended in fetal serum free media containing Neurobasal-ATM medium supplemented with 20 mM glutamine, 100 unites penicillin, 100 ug streptomycin, and B27 supplement all of which can be obtained for example from Invitrogen. The resulting cells can be plated at a low density of about 10 4 on round glass coverslips in twenty four well plates. Neurons were cultured at 37° C. in 95% oxygen and 5% carbon dioxide for about 3 days to about 5 days. The mitotic inhibitor, cytosine P-arabino furanosidde (about 1 μM) which can be obtained from Sigma-Aldrich can be added to cultured neurons to inhibit glial cell proliferation according to the procedure disclosed by Billingsley, M. L. and Mandel, H. G., Effects of DNA Synthesis Inhibitors on Post - Traumatic Glial Cell Proliferation , Journal of Pharmacology and Experimental Therapeutics, 222: 765-770 (1982).
Measurement of mobilized intracellular calcium ion (Ca 2+ ) in dissociate cultured neurons in response to peptide fragments of HIV-1 Tat polypeptides can be performed as disclosed by Brailoiu E. et al. Neurons cultured about 24 hours on coverslips as above-described were loaded in HBBS with 5μ Fura-2 AM dye at room temperature (about 20° C.) for about 45 minutes in the dark, then washed three times with Fura-2 AM free buffer and allowed to incubate to allow de-esterification of the dye for about 45 minutes. Under these conditions, compartmentalization of the dye was minimal (about 9.2%±0.2% n=6) as judged from the ratio of fluorescence signals after selective permeabilization of the plasma membrane (10 μM β-escein) and full permeabilization of the cultured cells (60 μg/mL saponin). The coverslips were mounted in a custom designed bath on the stage of a S300 Axiovert Nikon inverted microscope equipped with a C&L Instruments fluorimeter as described by Brailoiu et al. The Fura-2 fluorescent signal was calibrated by successive addition of 20 μg/mL digitonin, 20 mM EDTA, and 0.5 mM MnCl 2 . Ca 2+ values were then obtained using the procedures and equation described by Grynkiewicz, G., Poenie, M., and Tsien, R. Y. A New Generation of Ca 2+ Indicators With Greatly Improved Fluorescence Properties , J. Biol. Chem., 260:3440-3450 (1989)
Now referring to Table 1, measurement of intracellular calcium ion (Ca 2+) in dissociate cultured neurons shows that Ca 2+ can be mobilized in response to peptide fragments of HIV-1 Tat polypeptides and analogs thereof.





TABLE 1



Effect of HIV1-Tat Polypeptides on [Ca 2+ ] Response

in Dissociate and Cultured Cortical Neurons







SEQ



HIV1 Tat Polypeptide
NO.
[Ca 2+ ] nM
n








30-47 (Cys 30-Cys34)(Cys 31-Cys37)

No Response
6

30-57 Cys30Acm, Cys34Acm, (Cys31-Cys37)
15
197 ± 35
10

30-57 (Cys30-Cys34)(Cys31-Cys37)
13
528 ± 60
10

30-57 (Cys30-Cys31)(Cys34-Cys37)
12
258 ± 54
10

30-57 (Cys30-Cys37)(Cys31-Cys34)
8
197 ± 46
10

30-86 (Cys30-Cys34)(Cys31-Cys37)

390 ± 21
9

32-62 (Cys34-Cys37)

752 ± 59
8

41-60

66 ± 13
6

48-84

80 ± 28
7

49-57

No Response
8

58-86

54 ± 28
7

61-80

56 ± 20
6

62-86

No Response
5






































Now referring primarily to Table 1 and FIGS. 7-22 , it can be understood that HIV1 30-57 (Cys30-Cys34)(Cys31-Cys37) (SEQ ID.: 13) which further includes a second transport peptide region can transfer across biological membranes to enter intact living cells for regulation of biological responses which includes for the HIV1 molecule the mobilization of intracellular calcium ion (Ca 2+ ). By comparison, the that HIV1 30-47 (Cys30-Cys34)(Cys3′-Cys37) which lacks the second transport peptide region does not enter intact living cells and cannot mobilize intracellular calcium ion. Understandably the second peptide region of the invention can comprise the Tat transduction domain (RKKRRQRRR) HIV 1 49-57 as shown by FIG. 1 , which allows transfer of the first portion bioactive peptide region into the cell; however, it is not intended that the second peptide region of the invention be limited solely to the use of Tat transduction domain HIV 49-57 for transfer of the first portion of the peptide across the cell membrane, and it is now understood that Penetratin as shown by FIG. 2 can also allow the transfer of the first region of HIV1 peptides and analogs across cell membranes to the target binding site.
Also, it is now understood that the second transfer peptide region in the form of the Tat transduction domain (RKKRRQRRR) HIV 1 49-57 as shown by FIG. 1 or in the form of the Penetratin as shown by FIG. 2 can allow the transfer of a wide variety of peptide fragments, polypeptides, even when the first bioactive peptide region has a lesser level of biological activity or a greater level of biological activity. Accordingly, the second transfer region in the form of the Tat transduction domain (RKKRRQRRR) HIV 1 49-57 as shown by FIG. 1 or in the form of the Penetratin as shown by FIG. 2 can accomplish the transfer across biological membranes of any of the above-described peptide fragments, peptide fragment analogs, or peptide fragments or peptide fragment analogs of HIV1. Specifically, the second peptide region in the form of the TAT transduction domain or the Penetrin peptide can transfer any one or a mixture of any of biologically active regions of SEQ ID NOS.: 1-15.
The invention can further encompass peptides which include a first peptide region coupled to a second peptide region which can function in the cell to regulate any one of mobilizing intracellular calcium ion including but not limited to calcium from the endoplasmic reticulum, tharsigargin-sensitive and tharsigargin-insensitives stores, acid filled calcium stores; activating calcium-induced calcium release; opening voltage-gated calcium channels; acting as HIV-1 tat antagonists; acting as calcium mobilization antagonists; treating vascular disorders, stroke, or hypertension; treating HIV-1 dementia, Alzheimer's Disease, or other dementia or neurological disorders; treating elevated or low calcium levels; the production of interferon and the subsequent cascade of events leading to inhibition of protein synthesis; binding of a variety of cellular factors, including, but not limited to HIV long terminal repeat (LTR) RNA trans-activation response (TAR) element region, ATPase and DNA helicase, 36-kDA nuclear factor, as well as the transcriptional factors FFIID and Sp11; along with affecting neurotransmitter release including, but not limited to, the release of acetylcholine and inducing neurological impairments and neurotoxicity by mechanisms involving Ca 2+ homeostasis after binding and depolarizing neuronal membranes, and specifically includes without limitation each of the peptide structures described by SEQ ID NO.: 8, SEQ ID NO.: 12, SEQ ID NO.: 13, SEQ ID NO.: 15, HIV1 36-62 (Cys 34-Cys 37), HIV1 30-86 (Cys30-Cys34)(Cys31-Cys37) along with any analogs thereof, as above described.
Now referring to FIGS. 23-108 , which describe the structure of additional cell permeable bioactive peptide conjugates encompassed by the invention, each of which can be synthesized as above-described utilizing the appropriate protected amino acid residue in each cycle of the solid phase synthesis and then purified and treated in a manner similar to that above-described to generate the linear or disulfide bridged cell permeable bioactive conjugates set out by SEQ. ID. NOS.: 16-101.
FIGS. 23-65 (SEQ ID NOS.: 16-58) describe a second transfer peptide region which comprises the Tat transduction domain (RKKRRQRRR) HIV 1 49-57 ( FIG. 1 ). The Tat transduction domain (RKKRRQRRR) HIV 1 49-57 can when included at either the N-terminus or the C-terminus of the first biologically active peptide region as set out by SEQ ID NOS.: 8-50, and as shown by FIGS. 8-50 , can allow transfer of the entirety of the synthetic peptide into the living cell, including the first bioactive peptide region of the synthetic peptide which can bind the target receptor as an antagonist or agonist of the corresponding biological activity.
FIGS. 66-108 (SEQ ID NOS.: 59-101) describe an alternate second transfer peptide region which comprises the Penetratin peptide (RQIKIWFQNRRMKWKK) (SEQ ID NO.: 2)( FIG. 2 ). The Penetratin peptide (RQIKIWFQNRRMKWKK) when included at either the N-terminus or the C-terminus of SEQ ID NOS.: 59-101, as shown by FIGS. 66-108 , can allow transfer of the entirety of the synthetic peptide into the living cell, including the first bioactive peptide region of the synthetic peptide which can bind the target receptor as an antagonist or agonist of the biological activity above-described.
The biological activity of each of the synthetic peptide conjugates encompassed by the invention (SEQ ID NOS: 1-101) can be demonstrated by delivering the peptide conjugates by injection, tissue perfusion, or cell incubation, or aerosol, as above-described. The level of biological activity can be compared to the biological activity of the biologically active synthetic peptides conventionally assayed. As to each embodiment of the invention (SEQ ID NOS: 1-101) a level of such biological activity can be retained.
As can be easily understood from the foregoing, the basic concepts of the present invention may be embodied in a variety of ways. The invention involves numerous and varied embodiments of cell permeable bioactive peptide conjugates and methods of making and using such cell permeable bioactive peptide conjugates.
As such, the particular embodiments or elements of the invention disclosed by the description or shown in the figures accompanying this application are not intended to be limiting, but rather exemplary of the numerous and varied embodiments generically encompassed by the invention or equivalents encompassed with respect to any particular element thereof. In addition, the specific description of a single embodiment or element of the invention may not explicitly describe all embodiments or elements possible; many alternatives are implicitly disclosed by the description and figures.
It should be understood that each element of an apparatus or each step of a method may be described by an apparatus term or method term. Such terms can be substituted where desired to make explicit the implicitly broad coverage to which this invention is entitled. As but one example, it should be understood that all steps of a method may be disclosed as an action, a means for taking that action, or as an element which causes that action. Similarly, each element of an apparatus may be disclosed as the physical element or the action which that physical element facilitates. As but one example, the disclosure of a “conjugate” should be understood to encompass disclosure of the act of “conjugating”—whether explicitly discussed or not—and, conversely, were there effectively disclosure of the act of “conjugating”, such a disclosure should be understood to encompass disclosure of a “conjugate” and even a “means for conjugating.” Such alternative terms for each element or step are to be understood to be explicitly included in the description.
In addition, as to each term used it should be understood that unless its utilization in this application is inconsistent with such interpretation, common dictionary definitions should be understood to included in the description for each term as contained in the Random House Webster's Unabridged Dictionary, second edition, each definition hereby incorporated by reference.
Thus, the applicant(s) should be understood to claim at least: i) each of the cell permeable bioactive peptide conjugates herein disclosed and described, ii) the related methods disclosed and described, iii) similar, equivalent, and even implicit variations of each of these devices and methods, iv) those alternative embodiments which accomplish each of the functions shown, disclosed, or described, v) those alternative designs and methods which accomplish each of the functions shown as are implicit to accomplish that which is disclosed and described, vi) each feature, component, and step shown as separate and independent inventions, vii) the applications enhanced by the various systems or components disclosed, viii) the resulting products produced by such systems or components, ix) methods and apparatuses substantially as described hereinbefore and with reference to any of the accompanying examples, x) the various combinations and permutations of each of the previous elements disclosed.
The claims set forth in this specification, if any, are hereby incorporated by reference as part of this description of the invention, and the applicant expressly reserves the right to use all of or a portion of such incorporated content of such claims as additional description to support any of or all of the claims or any element or component thereof, and the applicant further expressly reserves the right to move any portion of or all of the incorporated content of such claims or any element or component thereof from the description into the claims or vice-versa as necessary to define the matter for which protection is sought by this application or by any subsequent application or continuation, division, or continuation-in-part application thereof, or to obtain any benefit of, reduction in fees pursuant to, or to comply with the patent laws, rules, or regulations of any country or treaty, and such content incorporated by reference shall survive during the entire pendency of this application including any subsequent continuation, division, or continuation-in-part application thereof or any reissue or extension thereon.